Works on Genomics and Phylogenetic Studies

Published research works tagged with the topic “Genomics and Phylogenetic Studies”.

299 works

Showing 1 to 50 of 299 works

An insight into the molecular identity and distribution of Microhyla taraiensis (Anura, Microhylidae) in Khyber Pakhtun…

The taxonomic identity and distribution of Pakistan’s Microhyla in Khyber Pakhtunkhwa has not been confirmed at species level using molecular data; historical records relied on mo…

Integrative taxonomy reveals previously undescribed diversity within the Gloydius himalayanus complex (Squamata, Viperi…

The Himalaya and Hindu Kush remain among the least scientifically explored mountain regions of Asia. Within their vertebrate fauna, pitvipers of the Gloydius himalayanus (Günther,…

Two new species of the bamboo-feeding genus Buloria from China (Hemiptera, Cicadellidae, Deltocephalinae)

Two new species of the bamboo-feeding leafhopper genus Buloria Distant, 1908 (Cicadellidae, Deltocephalinae, Mukariini), B. acuta Sun, Li, Chen & Yang, sp. nov. and B. falcata Sun…

Unraveling an extreme AT-rich and complex mitochondrial genome: the first complete mitogenome of the species-rich famil…

The assembly of insect mitochondrial genomes remains challenging in certain taxa due to extreme AT biases and long repetitive regions. The family Diaspididae (Hemiptera: Coccomorp…

Two complete mitochondrial genomes of the family Paradoxosomatidae (Diplopoda, Polydesmida) with phylogenetic implicati…

Millipedes (class Diplopoda) are vital soil invertebrates that play key roles in litter decomposition and nutrient cycling. However, their phylogenetic relationships remain poorly…

New mitochondrial genomes of Saccostrea (Mollusca, Ostreidae) specimens from Hainan Island

The taxonomic classification of oysters, particularly within the genus Saccostrea, remains poorly resolved due to limitations in traditional morphological and single-gene approach…

Complete mitochondrial genome of Echinorhynchus gadi (Acanthocephala, Echinorhynchida) and its phylogenetic implications

The Echinorhynchidae has a long research history, but its mitochondrial genome evolution remains poorly understood, hindering phylogenetic resolution. In this study, we report the…

Phylogeny of the Harnischia generic complex (Diptera, Chironomidae) inferred from twenty whole mitogenomes

This study presents the first comprehensive mitochondrial genome analysis of three Chironomidae genera, including sequencing, assembling, and annotating mitogenomes from two Parac…

Two new species of the genus Glaucocharis (Lepidoptera, Crambidae) from China

Two new species of the genus Glaucocharis, Glaucocharis weii Li & He, sp. nov., and G. pangda Li & He, sp. nov., encountered in the primaeval forests of southern Xizang of China, …

New contribution to the leafhopper genus Thapaia (Hemiptera, Cicadellidae, Typhlocybinae), with the description of a ne…

Thapaia malingensis Yuan & Song, sp. nov., a new species of Erythroneurini (Hemiptera, Cicadellidae, Typhlocybinae) from Maling River Canyon in Xingyi, China, is described and ill…

A new horned toad of Boulenophrys (Anura, Megophryidae) was discovered in Hubei Province, China

The diversity of the genus Boulenophrys, with around 72 species identified so far, is still thought to be highly underestimated, as it contains a large number of undescribed crypt…

New insights into the phylogeny of Tetrigoidea (Insecta, Orthoptera), with the announcement of the first mitogenome of …

The mitochondrial genome (mitogenome) has been widely used to infer the phylogeny, origin and evolution of insects. Although mitogenomic data have been used to study the phylogene…

Mountainous millipedes in Vietnam. V. The millipede genus Kronopolites Attems, 1914 (Diplopoda, Polydesmida, Paradoxoso…

The paradoxosomatid genus Kronopolites Attems, 1914 has been reviewed in the context of Vietnam’s fauna. A total of six species have been documented in the country, including a ne…

Comparative analysis of mitogenomes in six Scolopendra species (Chilopoda, Scolopendromorpha): insights into rare genet…

Six complete mitochondrial genomes from species within Scolopendra (Scolopendromorpha) (S. alcyona, S. calcarata, S. cataracta, S. lufengia, S. mazbii, and S. multidens) were anal…

Three new species of the genus Cicurina Menge, 1871 from Chongqing, China (Araneae, Cicurinidae)

Three new species of the spider genus Cicurina Menge, 1871, C. jinyun sp. nov. (♂♀), C. yinhe sp. nov. (♂♀) and C. zhangfui sp. nov. (♂), are described from Chongqing, China. Morp…

Six new species of the spider genus Clubiona Latreille, 1804 (Araneae, Clubionidae) from subtropical forests of Sichuan…

Six new species, belonging to three species groups of Clubiona Latreille, 1804 are described from both males and females: C. huntianling Yu & Li, sp. nov., C. rouqiu Yu & Li, sp. …

Two new species of Synotaxidae from eastern China (Araneae, Synotaxidae)

This paper describes two new synotaxid members from eastern China: the species Hamus qingming Yao, Liu & Lin, sp. nov. (♂, ♀, Fujian) and Tekellina zhangziqingi Yao, Liu & Lin, sp…

A new species of Eudigraphis (Diplopoda, Polyxenida, Polyxenidae) from East China, with embryonic and post-embryonic de…

Eudigraphis huadongensis Yang & Bu, sp. nov. from east China is described and illustrated. The new species is compared with other congeners in detail and observations about its em…

The complete mitochondrial genome of Siphonaria japonica (Heterobranchia, Siphonariidae) and its phylogenetic implicati…

The gastropod Siphonaria japonica, belonging to the family Siphonariidae, is an important grazer in the rocky intertidal zone of China, possessing significant ecological functions…

Taxonomic revision of the Quasipaa verrucospinosa complex (Amphibia, Dicroglossidae) in Vietnam, with descriptions of t…

This study provides a taxonomic revision of the Quasipaa verrucospinosa complex in Vietnam. Based on integrative taxonomic analyses, Quasipaa verrucospinosa sensu stricto is distr…

Diversity survey of Pholcus spiders (Araneae, Pholcidae) from eastern Sichuan and neighboring areas, with descriptions …

Thirteen spider species of the genus Pholcus Walckenaer, 1805 are reported from a diversity survey in eastern Sichuan and neighboring areas (northeastern Yunnan and western Guizho…

A survey of Belisana spiders (Araneae, Pholcidae) from eastern Sichuan, China

China exhibits remarkable diversity of the spider genus Belisana Thorell, 1898, while Sichuan Province has recorded only one species, Belisana maoer Yao & Li, 2020. In this study,…

Filling a zoogeographical gap in China: Taxonomic descriptions of six new spider species of the Pholcus phungiformes sp…

The spiders of the Pholcus phungiformes species group in China are distributed across the Lüliang Mountains and the Yanshan-Taihang Mountains in northern China, and the Changbai M…

Comparison of complete mitochondrial genome sequences in the Aporrectodea caliginosa species group (Annelida, Crassicli…

We present for the first time the complete mitochondrial genomes (mt genomes) of the earthworms Aporrectodea caliginosa and Ap. trapezoides (Clitellata, Megadrili) collected in Hu…

Four new species of Pseudopoda Jäger, 2000 (Araneae, Sparassidae, Heteropodinae) from China and Vietnam

Four new species of Pseudopoda Jäger, 2000 (Araneae, Sparassidae) are described based on material collected from China and Vietnam: P. campylotropa Zhang, Chen, Liu, Jäger & Hu, s…

Barbastella caspica (Chiroptera, Vespertilionidae) in China: first record and complete mitochondrial genome

The Caspian barbastelle, Barbastella caspica, has spread widely in the Caspian region, Iran, and Central Asia; however, there is no evidence of its occurrence in China so far. Dur…

Phylogenomics of North American cybaeid spiders (Araneae, Cybaeidae), including the description of new taxa from the Kl…

The systematics of humble-in-appearance brown spiders (“marronoids”), within a larger group of spiders with a modified retrolateral tibial apophysis (the RTA Clade), has long vexe…

Two new species of the Clubiona corticalis group (Araneae, Clubionidae) from Yunnan, China

Two new species belonging to the corticalis group of the sac spider genus Clubiona Latreille, 1804 are described from both males and females: Clubiona longyangensis sp. nov. and C…

Descriptions of four species of Polyxenida Verhoeff, 1934 (Diplopoda, Penicillata) from China, including one new specie…

This study describes a new species of Polyxenida from China, Lophoturus sineprocessus sp. nov., along with a species newly recorded from China: Eudigraphis nigricans (Miyosi, 1947…

Complete mitochondrial genome of Lepidocephalichthys berdmorei and its phylogenetic status within the family Cobitidae …

In this study, the complete mitochondrial genome of Lepidocephalichthys berdmorei was first determined by the primer walking sequence method. The complete mitochondrial genome was…

Diversity of spiders in Daba Mountain National Nature Reserve, Chongqing, China (I), three new Cicurina species of Cicu…

Three new species of the genus Cicurina Menge, 1871 are described from Daba Mountain National Nature Reserve, Chongqing, China: C. chengkou sp. nov. (♂♀), C. dabashan sp. nov. (♂♀…

Four new species of leptonetid spiders (Araneae, Leptonetidae) from Anhui Province, China

Four new species of leptonetid spiders from Anhui Province, China are recognized: Jingneta qishan Tong, sp. nov. (♂♀), Jingneta wukuishan Tong, sp. nov. (♂), Leptonetela jingde To…

Identification of two new species of Mecistocephalus (Chilopoda, Geophilomorpha, Mecistocephalidae) from southern China…

Mecistocephalus Newport, 1843 is the most diverse genus in the family Mecistocephalidae; however, only two species have been recorded in mainland China to date. Therefore, taxonom…

Nine new spider species of Belisana Thorell, 1898 (Araneae, Pholcidae) from karst caves, with a list of species of the …

Species of the spider genus Belisana Thorell, 1898 exhibit high diversity in Guizhou, southwestern China. Previously, only eight species of Belisana were recorded in Guizhou. In t…

A new species of the pill millipede genus Rhopalomeris Verhoeff, 1906 (Diplopoda, Glomerida, Glomeridae) from Myanmar, …

The taxonomy of the pill millipede genus Rhopalomeris Verhoeff, 1906, which is restricted to Indochina and currently comprises six described species, is refined and updated. An in…

Tenkana, a new genus of jumping spiders (Salticidae, Plexippina) from South Asia, with the new Indian species Tenkana j…

We describe a new plexippine genus, Tenkana gen. nov., supported by phylogenomic data from ultraconserved elements (UCEs), Sanger sequences of four genes, and morphological eviden…

Old World Micropholcus spiders, with first records of acrocerid parasitoids in Pholcidae (Araneae)

Micropholcus Deeleman-Reinhold & Prinsen, 1987 is one of only two Pholcidae genera known to occur both in the Old and New Worlds. However, there are major morphological and ecolog…

Three new spider species of Belisana Thorell, 1898 (Araneae, Pholcidae) from karst caves, with a list of Belisana speci…

Three new species of the genus Belisana Thorell, 1898 are described from karst caves in Guangxi, China: Belisana langping Zhang, Li & Yao, sp. nov. (♂♀), B. lingui Zhang, Li & Yao…

Three new species of dragon pseudoscorpions (Pseudoscorpiones, Pseudotyrannochthoniidae) from China

Three new pseudoscorpions in the family Pseudotyrannochthoniidae are described from China: Allochthonius hispidus sp. nov. from Chongqing (Wushan County), Spelaeochthonius huangla…

Eight new spider species of Belisana Thorell, 1898 (Araneae, Pholcidae), with an updated overview of Belisana species f…

In this study, eight new species are described from the subtropical parts of Yunnan Province in southwestern China: Belisana honghe Zhang, Li & Yao, sp. nov. (♂♀), B. jiuxiang Zha…

Two new species of the genus Cheiracanthium C. L. Koch, 1839 (Araneae, Cheiracanthiidae) from China

Two species of the long-legged sac spider genus Cheiracanthium C. L. Koch, 1839 collected from China are diagnosed and described as new to science: Cheiracanthium bannaensis sp. n…

Rediscovery of Lycodon gammiei (Blanford, 1878) (Serpentes, Colubridae) in Xizang, China, with comments on its systemat…

Lycodon gammiei (Blanford, 1878), a rarely encountered species of Asian snake, is characterized by ambiguous systematics and biology. Based on a sole specimen of L. gammiei redisc…

Mitochondrial genome data provide insights into the phylogenetic relationships within Triplophysa dalaica (Kessler, 187…

Due to the detrimental effect of formaldehyde on DNA, ethanol has replaced formalin as the primary preservative for animal specimens. However, short-term formalin fixation of spec…

Revalidation of the jumping spider genus Cheliceroides Żabka, 1985 based on molecular and morphological data (Araneae, …

The monotypic genus Cheliceroides Żabka, 1985 is revalidated based on both molecular sequence data (ultra-conserved elements and protein coding genes of mitochondrial genomes) and…

A new species of the genus Soriculus (Soricidae, Eulipotyphla, Mammalia) from Medog in the eastern Himalaya

Himalayan shrews of the genus Soriculus (Soricidae, Eulipotyphla), currently represented by four nominal species, are endemic to the Himalayas and the Gaoligong Mountains. In Apri…

First mitogenomic characterization of Macromotettixoides (Orthoptera, Tetrigidae), with the descriptions of two new spe…

Classification of species is commonly based on morphological, molecular, and distribution depending on the taxa. Macromotettixoides Zheng, Wei & Jiang, 2005 and Formosatettix Tink…

A new species of the Pholcus phungiformes species group (Araneae, Pholcidae) from Liaoning, China, with identification …

A new species of pholcid spiders, Pholcus fengmeii Zhang, He & Yao, sp. nov. (♂♀), is described from Liaoning Province, China. The new species belongs to the speciose phungiformes…

A new odorous frog species of Odorrana (Amphibia, Anura, Ranidae) from Guizhou Province, China

The frog genus Odorrana is distributed across east and southeastern Asia. Based on morphological differences and molecular phylogenetics, a new species of the genus occurring from…

Ghatippus paschima, a new species and genus of plexippine jumping spider from the Western Ghats of India (Salticidae, P…

We propose a new genus of plexippine jumping spiders from the Western Ghats of India based on the new species Ghatippus paschima gen. et sp. nov. While it bears a superficial rese…

Complete mitochondrial genome of Guigarra cailaoensis Wang, Chen & Zheng, 2022 (Cypriniformes, Cyprinidae) and its phy…

Guigarra cailaoensis is a member of family Cyprinidae, subfamily Labeoninae (Cypriniformes) which was recently discovered in southwestern China. Following its initial description,…